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RankSVM-PTM

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RankSVM-PTM: is a tool for predicting acetylation and succinylation in proteins. The program is implemented in Matlab.

Reference

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Yan Xu, Zu Wang, Yingxi Yang, Yuanhai Shao. Prediction of acetylation and succinylation in proteins based on multi-label learning RankSVM [J]. Submitted,2017

Yan Xu, Yingxi Yang, Xingyan Li. Prediction of Human Serine, Threonine and Tyrosine Phosphorylated Proteins Based on Multi-label Learning[J]. Submitted,2018

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• 1. Operating environment:
  
  The operating system of installed MATLAB.
  
  
  • 2. File description:
    
    RankSVM-PTM.zip is main program.
    
    
    • 3. Instructions:
      
      Just run the example1.m program (AAC.mat,AAindex.mat,CKSAAP.mat are three feature extraction results about benchmark dataset in this paper)
      • 4. Software and Data
        
        Download from:[RankSVM-PTM.zip]
        
        
        

        Contacts

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        Any question or advice please email to xuyan@ustb.edu.cn or shaoyuanhai21@163.com.

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        • Last updated: July 30, 2017